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I am surprise you get such a huge pH swing. The graph shows one of my tanks that I monitor the pH and temperature on a continuous basis. It has a 0.3 variation.

I was surprised, but we had a big thread on UKAPS a while ago, where a lot of people monitored their tank pH over a photo-cycle, tanks were with and without added CO2, with and without flow etc. One thing that also came out of this was that a lot of pH monitoring system probes don't give accurate readings below pH7 (for example "S*neye Freshwater").I am surprise you get such a huge pH swing.
Floating plant would help dim the tank. Another option would be covering some of the lights (black electrical tape, maybe?).
Sphagnum peat is at least as good as any of the other products, have a look at this thread <http://www.apistogramma.com/forum/threads/another-peat-filtration-question.11247/#post-60869>.Do you guys feel that there is any significant difference between using sphagnum peat moss or in the various commercial peat filter products available?
More plants.I do not feel completely satisfied with my new layout. Do you guys have any other suggestions or advice for improvement?
Ceratopteris is good in soft water, Java Fern, Bolbitis heudeloti, Anubias and Java moss are all good, along with most Cryptocoyne spp.What plants would you recommend besides the floaters and Echinodorus that would be able to handle a pH of 5.5 to 6.0?
I'd keep the canister, you've already got it and its an Eheim. I have what appears to be a huge amount of flow on some of the tanks (I use whatever second hand Eheim filters I can get via eBay), but as you add plants and wood etc it deflects the flow.Should I ditch the cannister and replace with a sponge filter? This is something I was considering doing anyway as I've read in numerous places that most Apisto like calm waters.
That works.I have a piece of fishing line tied to two suckers and stretched across the tank just below water level. That helps to keep the floaters in place.